Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN7AQ01118 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN7AQ01118 AL353779.1-201ENST00000434793 351 ntBASIC20.68■□□□□ 0.9
SCN7AQ01118 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.68■□□□□ 0.9
SCN7AQ01118 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SCN7AQ01118 AL139011.1-202ENST00000642063 584 ntBASIC20.68■□□□□ 0.9
SCN7AQ01118 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN7AQ01118 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN7AQ01118 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN7AQ01118 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN7AQ01118 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN7AQ01118 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCN7AQ01118 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SCN7AQ01118 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN7AQ01118 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SCN7AQ01118 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN7AQ01118 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN7AQ01118 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.67■□□□□ 0.9
SCN7AQ01118 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN7AQ01118 CHCHD2P3-201ENST00000603038 451 ntBASIC20.67■□□□□ 0.9
SCN7AQ01118 AC017083.2-201ENST00000608069 979 ntBASIC20.67■□□□□ 0.9
SCN7AQ01118 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AC007541.1-201ENST00000570282 1469 ntBASIC20.67■□□□□ 0.9
SCN7AQ01118 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
SCN7AQ01118 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN7AQ01118 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN7AQ01118 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN7AQ01118 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN7AQ01118 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SCN7AQ01118 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
SCN7AQ01118 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN7AQ01118 AC023310.3-201ENST00000557027 670 ntBASIC20.66■□□□□ 0.9
SCN7AQ01118 AC100756.1-201ENST00000562736 682 ntBASIC20.66■□□□□ 0.9
SCN7AQ01118 AC138749.3-201ENST00000567691 622 ntBASIC20.66■□□□□ 0.9
SCN7AQ01118 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN7AQ01118 AC116165.1-201ENST00000611806 668 ntBASIC20.66■□□□□ 0.9
SCN7AQ01118 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SCN7AQ01118 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SCN7AQ01118 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN7AQ01118 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SCN7AQ01118 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN7AQ01118 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 AC098614.1-201ENST00000368528 745 ntBASIC20.65■□□□□ 0.9
SCN7AQ01118 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.65■□□□□ 0.9
SCN7AQ01118 TTTY23B-201ENST00000442790 549 ntBASIC20.65■□□□□ 0.9
SCN7AQ01118 AL589987.1-201ENST00000453380 819 ntBASIC20.65■□□□□ 0.9
SCN7AQ01118 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN7AQ01118 AL109936.8-201ENST00000641772 604 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms