Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.25□□□□□ -0.77
HSPG2P98160 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.25□□□□□ -0.77
HSPG2P98160 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.25□□□□□ -0.77
HSPG2P98160 RRP7BP-205ENST00000566851 833 ntBASIC10.25□□□□□ -0.77
HSPG2P98160 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.25□□□□□ -0.77
HSPG2P98160 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.25□□□□□ -0.77
HSPG2P98160 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.25□□□□□ -0.77
HSPG2P98160 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
HSPG2P98160 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
HSPG2P98160 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
HSPG2P98160 KRT8P22-201ENST00000562317 1415 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.24□□□□□ -0.77
HSPG2P98160 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.24□□□□□ -0.77
HSPG2P98160 AC061975.2-201ENST00000581722 295 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC10.24□□□□□ -0.77
HSPG2P98160 AL008638.5-201ENST00000623814 1298 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
HSPG2P98160 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
HSPG2P98160 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.24□□□□□ -0.77
HSPG2P98160 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
HSPG2P98160 U62317.3-201ENST00000608319 855 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.24□□□□□ -0.77
HSPG2P98160 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC10.24□□□□□ -0.77
HSPG2P98160 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.24□□□□□ -0.77
HSPG2P98160 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.24□□□□□ -0.77
HSPG2P98160 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.24□□□□□ -0.77
HSPG2P98160 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.24□□□□□ -0.77
HSPG2P98160 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.24□□□□□ -0.77
HSPG2P98160 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 FRMD8P1-201ENST00000440433 1524 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
HSPG2P98160 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.24□□□□□ -0.77
HSPG2P98160 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.24□□□□□ -0.77
HSPG2P98160 FAM21FP-201ENST00000426241 1131 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.24□□□□□ -0.77
HSPG2P98160 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.24□□□□□ -0.77
HSPG2P98160 AC020914.3-201ENST00000594712 304 ntBASIC10.24□□□□□ -0.77
HSPG2P98160 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
HSPG2P98160 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.24□□□□□ -0.77
HSPG2P98160 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC10.23□□□□□ -0.77
HSPG2P98160 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC10.23□□□□□ -0.77
HSPG2P98160 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 MSTO2P-201ENST00000314835 1709 ntBASIC10.23□□□□□ -0.77
HSPG2P98160 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.23□□□□□ -0.77
HSPG2P98160 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
HSPG2P98160 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 AC091804.1-201ENST00000486888 567 ntBASIC10.23□□□□□ -0.77
HSPG2P98160 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.23□□□□□ -0.77
HSPG2P98160 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC10.23□□□□□ -0.77
HSPG2P98160 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.23□□□□□ -0.77
HSPG2P98160 AC074044.1-201ENST00000609673 707 ntBASIC10.23□□□□□ -0.77
HSPG2P98160 AL607033.1-201ENST00000623900 1599 ntBASIC10.23□□□□□ -0.77
HSPG2P98160 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC10.23□□□□□ -0.77
HSPG2P98160 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC10.23□□□□□ -0.77
HSPG2P98160 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
HSPG2P98160 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
HSPG2P98160 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.23□□□□□ -0.77
HSPG2P98160 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
HSPG2P98160 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
HSPG2P98160 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms