Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.9■□□□□ 0.14
TRA2BP62995 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.9■□□□□ 0.14
TRA2BP62995 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.9■□□□□ 0.14
TRA2BP62995 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.9■□□□□ 0.14
TRA2BP62995 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRA2BP62995 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.9■□□□□ 0.14
TRA2BP62995 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRA2BP62995 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.9■□□□□ 0.14
TRA2BP62995 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.9■□□□□ 0.14
TRA2BP62995 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.9■□□□□ 0.14
TRA2BP62995 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRA2BP62995 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRA2BP62995 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRA2BP62995 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRA2BP62995 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.89■□□□□ 0.13
TRA2BP62995 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 AC098831.1-202ENST00000438821 336 ntBASIC15.89■□□□□ 0.13
TRA2BP62995 FAM185BP-201ENST00000443595 716 ntBASIC15.89■□□□□ 0.13
TRA2BP62995 RNA5SP419-201ENST00000515908 135 ntBASIC15.89■□□□□ 0.13
TRA2BP62995 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
TRA2BP62995 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 OR7E47P-204ENST00000575924 449 ntBASIC15.89■□□□□ 0.13
TRA2BP62995 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRA2BP62995 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.89■□□□□ 0.13
TRA2BP62995 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRA2BP62995 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRA2BP62995 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRA2BP62995 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRA2BP62995 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 MRPL3P1-201ENST00000400109 1033 ntBASIC15.88■□□□□ 0.13
TRA2BP62995 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.88■□□□□ 0.13
TRA2BP62995 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRA2BP62995 AC108751.1-201ENST00000490852 363 ntBASIC15.88■□□□□ 0.13
TRA2BP62995 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.88■□□□□ 0.13
TRA2BP62995 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.88■□□□□ 0.13
TRA2BP62995 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.88■□□□□ 0.13
TRA2BP62995 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRA2BP62995 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.88■□□□□ 0.13
TRA2BP62995 SLC25A6P4-201ENST00000586535 553 ntBASIC15.88■□□□□ 0.13
TRA2BP62995 AL049840.3-201ENST00000602669 611 ntBASIC15.88■□□□□ 0.13
TRA2BP62995 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.88■□□□□ 0.13
TRA2BP62995 AC116407.3-201ENST00000623905 1129 ntBASIC15.88■□□□□ 0.13
TRA2BP62995 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.88■□□□□ 0.13
TRA2BP62995 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRA2BP62995 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRA2BP62995 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.88■□□□□ 0.13
TRA2BP62995 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRA2BP62995 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.88■□□□□ 0.13
TRA2BP62995 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRA2BP62995 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms