Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 AL353732.1-201ENST00000569618 1459 ntBASIC17.73■□□□□ 0.43
USP46P62068 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.73■□□□□ 0.43
USP46P62068 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
USP46P62068 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP46P62068 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP46P62068 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 AC012569.1-201ENST00000591191 1524 ntBASIC17.72■□□□□ 0.43
USP46P62068 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.72■□□□□ 0.43
USP46P62068 CNN2P11-201ENST00000429351 262 ntBASIC17.72■□□□□ 0.43
USP46P62068 ADH5P3-201ENST00000433842 1137 ntBASIC17.72■□□□□ 0.43
USP46P62068 ACTG1P14-201ENST00000446382 1122 ntBASIC17.72■□□□□ 0.43
USP46P62068 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.72■□□□□ 0.43
USP46P62068 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
USP46P62068 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.72■□□□□ 0.43
USP46P62068 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.72■□□□□ 0.43
USP46P62068 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
USP46P62068 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP46P62068 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP46P62068 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USP46P62068 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP46P62068 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
USP46P62068 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP46P62068 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.71■□□□□ 0.43
USP46P62068 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 AC092068.3-201ENST00000587894 2016 ntBASIC17.71■□□□□ 0.43
USP46P62068 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.71■□□□□ 0.43
USP46P62068 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.71■□□□□ 0.43
USP46P62068 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 AC112191.1-201ENST00000523689 701 ntBASIC17.71■□□□□ 0.43
USP46P62068 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
USP46P62068 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.71■□□□□ 0.43
USP46P62068 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.71■□□□□ 0.43
USP46P62068 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.71■□□□□ 0.43
USP46P62068 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
USP46P62068 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.71■□□□□ 0.43
USP46P62068 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
USP46P62068 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.71■□□□□ 0.43
USP46P62068 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
USP46P62068 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP46P62068 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
USP46P62068 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.7■□□□□ 0.42
USP46P62068 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP46P62068 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP46P62068 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.7■□□□□ 0.42
USP46P62068 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms