Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
WNT3AP56704 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
WNT3AP56704 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.04■□□□□ 0.32
WNT3AP56704 PRSS29P-201ENST00000440800 595 ntBASIC17.04■□□□□ 0.32
WNT3AP56704 AC009947.1-201ENST00000444350 727 ntBASIC17.04■□□□□ 0.32
WNT3AP56704 FDX1P1-201ENST00000449115 551 ntBASIC17.04■□□□□ 0.32
WNT3AP56704 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.04■□□□□ 0.32
WNT3AP56704 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.04■□□□□ 0.32
WNT3AP56704 MIR4751-201ENST00000578027 74 ntBASIC17.04■□□□□ 0.32
WNT3AP56704 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.04■□□□□ 0.32
WNT3AP56704 AC010654.1-201ENST00000615722 808 ntBASIC17.04■□□□□ 0.32
WNT3AP56704 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.04■□□□□ 0.32
WNT3AP56704 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
WNT3AP56704 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.04■□□□□ 0.32
WNT3AP56704 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
WNT3AP56704 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.04■□□□□ 0.32
WNT3AP56704 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
WNT3AP56704 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
WNT3AP56704 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.03■□□□□ 0.32
WNT3AP56704 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
WNT3AP56704 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
WNT3AP56704 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
WNT3AP56704 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.03■□□□□ 0.32
WNT3AP56704 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 AC079776.4-201ENST00000511039 504 ntBASIC17.03■□□□□ 0.32
WNT3AP56704 AC005412.3-201ENST00000580309 715 ntBASIC17.03■□□□□ 0.32
WNT3AP56704 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 AC131009.4-201ENST00000624048 1740 ntBASIC17.03■□□□□ 0.32
WNT3AP56704 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 AL353732.1-201ENST00000569618 1459 ntBASIC17.03■□□□□ 0.32
WNT3AP56704 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.03■□□□□ 0.32
WNT3AP56704 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
WNT3AP56704 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.02■□□□□ 0.32
WNT3AP56704 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.02■□□□□ 0.32
WNT3AP56704 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
WNT3AP56704 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.02■□□□□ 0.32
WNT3AP56704 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
WNT3AP56704 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.02■□□□□ 0.32
WNT3AP56704 AL139011.1-202ENST00000642063 584 ntBASIC17.02■□□□□ 0.32
WNT3AP56704 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.02■□□□□ 0.32
WNT3AP56704 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
WNT3AP56704 SNX33P1-201ENST00000592116 1762 ntBASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms