Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH4P55283 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH4P55283 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.19■□□□□ 0.34
CDH4P55283 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH4P55283 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.19■□□□□ 0.34
CDH4P55283 MIR4469-201ENST00000583919 79 ntBASIC17.19■□□□□ 0.34
CDH4P55283 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 AC139530.3-201ENST00000620344 690 ntBASIC17.19■□□□□ 0.34
CDH4P55283 AL161645.1-201ENST00000622716 1255 ntBASIC17.19■□□□□ 0.34
CDH4P55283 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH4P55283 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH4P55283 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH4P55283 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH4P55283 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH4P55283 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH4P55283 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH4P55283 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH4P55283 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH4P55283 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 AC092474.2-201ENST00000424288 719 ntBASIC17.18■□□□□ 0.34
CDH4P55283 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH4P55283 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 CEND1P1-201ENST00000451006 455 ntBASIC17.18■□□□□ 0.34
CDH4P55283 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH4P55283 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH4P55283 AC099522.2-201ENST00000607001 744 ntBASIC17.18■□□□□ 0.34
CDH4P55283 AC055717.3-201ENST00000622967 595 ntBASIC17.18■□□□□ 0.34
CDH4P55283 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 KRT8P39-201ENST00000396270 1433 ntBASIC17.18■□□□□ 0.34
CDH4P55283 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH4P55283 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH4P55283 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH4P55283 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH4P55283 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH4P55283 SNX33P1-201ENST00000592116 1762 ntBASIC17.17■□□□□ 0.34
CDH4P55283 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDH4P55283 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH4P55283 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH4P55283 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH4P55283 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 AC211486.1-202ENST00000416371 468 ntBASIC17.17■□□□□ 0.34
CDH4P55283 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH4P55283 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH4P55283 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 AC211476.1-201ENST00000503899 468 ntBASIC17.17■□□□□ 0.34
CDH4P55283 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH4P55283 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH4P55283 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH4P55283 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH4P55283 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDH4P55283 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH4P55283 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms