Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 FLJ38576-201ENST00000623820 2459 ntBASIC18.41■□□□□ 0.54
NCKAP1LP55160 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 AC109635.5-201ENST00000533593 962 ntBASIC18.41■□□□□ 0.54
NCKAP1LP55160 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 MTDHP5-201ENST00000598980 586 ntBASIC18.41■□□□□ 0.54
NCKAP1LP55160 AL009183.1-201ENST00000603760 355 ntBASIC18.41■□□□□ 0.54
NCKAP1LP55160 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCKAP1LP55160 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.41■□□□□ 0.54
NCKAP1LP55160 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 AL512652.2-201ENST00000625156 1716 ntBASIC18.4■□□□□ 0.54
NCKAP1LP55160 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 PMS2P4-201ENST00000412466 1052 ntBASIC18.4■□□□□ 0.54
NCKAP1LP55160 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 NKILA-202ENST00000614771 2598 ntBASIC18.4■□□□□ 0.54
NCKAP1LP55160 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NCKAP1LP55160 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1LP55160 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCKAP1LP55160 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCKAP1LP55160 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.39■□□□□ 0.54
NCKAP1LP55160 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.39■□□□□ 0.54
NCKAP1LP55160 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.39■□□□□ 0.54
NCKAP1LP55160 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCKAP1LP55160 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
NCKAP1LP55160 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCKAP1LP55160 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
NCKAP1LP55160 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCKAP1LP55160 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCKAP1LP55160 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 BX842568.4-201ENST00000421222 227 ntBASIC18.39■□□□□ 0.53
NCKAP1LP55160 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
NCKAP1LP55160 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1LP55160 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1LP55160 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms