Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE6CP51160 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
PDE6CP51160 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 AC078925.2-201ENST00000624013 1973 ntBASIC18.25■□□□□ 0.51
PDE6CP51160 KRT18P13-201ENST00000400056 1290 ntBASIC18.25■□□□□ 0.51
PDE6CP51160 MED15P5-201ENST00000423150 992 ntBASIC18.25■□□□□ 0.51
PDE6CP51160 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDE6CP51160 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE6CP51160 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PDE6CP51160 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDE6CP51160 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 AP002414.3-201ENST00000589352 1468 ntBASIC18.25■□□□□ 0.51
PDE6CP51160 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 FLJ38576-201ENST00000623820 2459 ntBASIC18.25■□□□□ 0.51
PDE6CP51160 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE6CP51160 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 AL590787.1-201ENST00000568856 1315 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 RNF216P1-203ENST00000404404 2427 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.24■□□□□ 0.51
PDE6CP51160 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.24■□□□□ 0.51
PDE6CP51160 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 AP002414.1-201ENST00000391405 1147 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.24■□□□□ 0.51
PDE6CP51160 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 POLD2P1-201ENST00000511220 997 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 AC034105.1-201ENST00000563488 319 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 AL139424.1-201ENST00000607572 797 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 AC006538.3-201ENST00000612495 578 ntBASIC18.24■□□□□ 0.51
PDE6CP51160 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDE6CP51160 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.24■□□□□ 0.51
PDE6CP51160 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PDE6CP51160 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6CP51160 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PDE6CP51160 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6CP51160 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.23■□□□□ 0.51
PDE6CP51160 AC046158.3-201ENST00000624947 2558 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6CP51160 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDE6CP51160 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDE6CP51160 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6CP51160 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6CP51160 MIR940-201ENST00000401276 94 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.23■□□□□ 0.51
PDE6CP51160 AP002490.2-201ENST00000524791 560 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 UNC93B6-202ENST00000528242 690 ntBASIC18.23■□□□□ 0.51
PDE6CP51160 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms