Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCT4P50991 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCT4P50991 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCT4P50991 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCT4P50991 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.22■□□□□ 0.99
CCT4P50991 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCT4P50991 CNN2P11-201ENST00000429351 262 ntBASIC21.22■□□□□ 0.99
CCT4P50991 AC074386.1-202ENST00000463561 864 ntBASIC21.22■□□□□ 0.99
CCT4P50991 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.22■□□□□ 0.99
CCT4P50991 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.22■□□□□ 0.99
CCT4P50991 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.22■□□□□ 0.99
CCT4P50991 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.22■□□□□ 0.99
CCT4P50991 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.22■□□□□ 0.99
CCT4P50991 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCT4P50991 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
CCT4P50991 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.22■□□□□ 0.99
CCT4P50991 PRORSD1P-202ENST00000563365 2154 ntBASIC21.21■□□□□ 0.99
CCT4P50991 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCT4P50991 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCT4P50991 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CCT4P50991 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.21■□□□□ 0.99
CCT4P50991 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 AL603756.1-201ENST00000606511 2163 ntBASIC21.21■□□□□ 0.99
CCT4P50991 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.21■□□□□ 0.99
CCT4P50991 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.21■□□□□ 0.99
CCT4P50991 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCT4P50991 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.21■□□□□ 0.99
CCT4P50991 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.2■□□□□ 0.99
CCT4P50991 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.2■□□□□ 0.98
CCT4P50991 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.2■□□□□ 0.98
CCT4P50991 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.2■□□□□ 0.98
CCT4P50991 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.2■□□□□ 0.98
CCT4P50991 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.2■□□□□ 0.98
CCT4P50991 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCT4P50991 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCT4P50991 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCT4P50991 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
CCT4P50991 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.19■□□□□ 0.98
CCT4P50991 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.19■□□□□ 0.98
CCT4P50991 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.19■□□□□ 0.98
CCT4P50991 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCT4P50991 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.19■□□□□ 0.98
CCT4P50991 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
CCT4P50991 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.19■□□□□ 0.98
CCT4P50991 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.19■□□□□ 0.98
CCT4P50991 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms