Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 ME2P1-201ENST00000426028 1970 ntBASIC16.24■□□□□ 0.19
SLC6A12P48065 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC6A12P48065 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A12P48065 AL031731.1-201ENST00000642131 2094 ntBASIC16.24■□□□□ 0.19
SLC6A12P48065 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A12P48065 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.24■□□□□ 0.19
SLC6A12P48065 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC6A12P48065 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A12P48065 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A12P48065 AP001350.2-201ENST00000625104 1094 ntBASIC16.24■□□□□ 0.19
SLC6A12P48065 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A12P48065 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A12P48065 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A12P48065 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A12P48065 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SLC6A12P48065 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A12P48065 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A12P48065 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A12P48065 AC006449.5-201ENST00000610658 2098 ntBASIC16.23■□□□□ 0.19
SLC6A12P48065 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC6A12P48065 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC6A12P48065 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC6A12P48065 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC6A12P48065 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A12P48065 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC6A12P48065 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A12P48065 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC6A12P48065 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.23■□□□□ 0.19
SLC6A12P48065 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC6A12P48065 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A12P48065 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A12P48065 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A12P48065 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC6A12P48065 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A12P48065 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC6A12P48065 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC6A12P48065 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC6A12P48065 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 IGLL3P-201ENST00000412472 434 ntBASIC16.22■□□□□ 0.19
SLC6A12P48065 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 CXCL1P1-201ENST00000502804 216 ntBASIC16.22■□□□□ 0.19
SLC6A12P48065 RNA5SP415-201ENST00000517246 115 ntBASIC16.22■□□□□ 0.19
SLC6A12P48065 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 MIR4751-201ENST00000578027 74 ntBASIC16.22■□□□□ 0.19
SLC6A12P48065 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC6A12P48065 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC6A12P48065 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms