Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CHKAP35790 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHKAP35790 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHKAP35790 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.82■□□□□ 0.44
CHKAP35790 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHKAP35790 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHKAP35790 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.82■□□□□ 0.44
CHKAP35790 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 AL590787.1-201ENST00000568856 1315 ntBASIC17.82■□□□□ 0.44
CHKAP35790 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CHKAP35790 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 MRPL20P1-201ENST00000400819 433 ntBASIC17.82■□□□□ 0.44
CHKAP35790 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.82■□□□□ 0.44
CHKAP35790 BX842568.4-201ENST00000421222 227 ntBASIC17.82■□□□□ 0.44
CHKAP35790 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.82■□□□□ 0.44
CHKAP35790 VN2R19P-201ENST00000442399 1052 ntBASIC17.82■□□□□ 0.44
CHKAP35790 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.82■□□□□ 0.44
CHKAP35790 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.82■□□□□ 0.44
CHKAP35790 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.82■□□□□ 0.44
CHKAP35790 AC006538.3-201ENST00000612495 578 ntBASIC17.82■□□□□ 0.44
CHKAP35790 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHKAP35790 AC004790.2-201ENST00000623588 572 ntBASIC17.82■□□□□ 0.44
CHKAP35790 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.82■□□□□ 0.44
CHKAP35790 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CHKAP35790 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.82■□□□□ 0.44
CHKAP35790 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHKAP35790 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.82■□□□□ 0.44
CHKAP35790 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHKAP35790 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CHKAP35790 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.81■□□□□ 0.44
CHKAP35790 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CHKAP35790 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHKAP35790 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.81■□□□□ 0.44
CHKAP35790 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHKAP35790 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.81■□□□□ 0.44
CHKAP35790 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.81■□□□□ 0.44
CHKAP35790 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHKAP35790 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.81■□□□□ 0.44
CHKAP35790 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.81■□□□□ 0.44
CHKAP35790 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHKAP35790 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.81■□□□□ 0.44
CHKAP35790 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHKAP35790 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHKAP35790 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CHKAP35790 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHKAP35790 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHKAP35790 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHKAP35790 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.8■□□□□ 0.44
CHKAP35790 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.8■□□□□ 0.44
CHKAP35790 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 AC010654.1-201ENST00000615722 808 ntBASIC17.8■□□□□ 0.44
CHKAP35790 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms