Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KRT9P35527 AP000867.4-201ENST00000641616 219 ntBASIC18.5■□□□□ 0.55
KRT9P35527 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT9P35527 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT9P35527 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT9P35527 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT9P35527 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT9P35527 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KRT9P35527 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
KRT9P35527 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
KRT9P35527 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT9P35527 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.49■□□□□ 0.55
KRT9P35527 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
KRT9P35527 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KRT9P35527 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KRT9P35527 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
KRT9P35527 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT9P35527 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
KRT9P35527 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT9P35527 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.48■□□□□ 0.55
KRT9P35527 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.48■□□□□ 0.55
KRT9P35527 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 AC132008.2-207ENST00000454517 770 ntBASIC18.48■□□□□ 0.55
KRT9P35527 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 DUX4L17-201ENST00000557360 1267 ntBASIC18.48■□□□□ 0.55
KRT9P35527 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
KRT9P35527 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.48■□□□□ 0.55
KRT9P35527 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
KRT9P35527 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KRT9P35527 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
KRT9P35527 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT9P35527 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT9P35527 AC132872.4-202ENST00000622924 2756 ntBASIC18.47■□□□□ 0.55
KRT9P35527 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT9P35527 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT9P35527 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT9P35527 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms