Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 PCDHA1-201ENST00000378133 2726 ntBASIC15.82■□□□□ 0.12
CHMP24386 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 MRPL3P1-201ENST00000400109 1033 ntBASIC15.82■□□□□ 0.12
CHMP24386 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 KLF4P1-201ENST00000412782 1185 ntBASIC15.82■□□□□ 0.12
CHMP24386 AC018712.1-201ENST00000455767 687 ntBASIC15.82■□□□□ 0.12
CHMP24386 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CHMP24386 AP001005.1-201ENST00000571755 1248 ntBASIC15.82■□□□□ 0.12
CHMP24386 STK25P1-201ENST00000585406 838 ntBASIC15.82■□□□□ 0.12
CHMP24386 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 AC103702.1-201ENST00000548801 2630 ntBASIC15.82■□□□□ 0.12
CHMP24386 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 AC132938.5-201ENST00000624980 1813 ntBASIC15.82■□□□□ 0.12
CHMP24386 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP24386 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP24386 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.82■□□□□ 0.12
CHMP24386 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP24386 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP24386 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CHMP24386 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CHMP24386 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CHMP24386 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHMP24386 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP24386 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP24386 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 AC021087.4-201ENST00000563761 564 ntBASIC15.81■□□□□ 0.12
CHMP24386 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP24386 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP24386 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP24386 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP24386 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 AL022326.1-202ENST00000641533 845 ntBASIC15.81■□□□□ 0.12
CHMP24386 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CHMP24386 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP24386 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms