Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATP4AP20648 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP4AP20648 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP4AP20648 AC023141.5-201ENST00000458585 616 ntBASIC18.65■□□□□ 0.58
ATP4AP20648 RFPL4AP1-201ENST00000530883 850 ntBASIC18.65■□□□□ 0.58
ATP4AP20648 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.65■□□□□ 0.58
ATP4AP20648 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP4AP20648 AC013467.2-201ENST00000605472 835 ntBASIC18.65■□□□□ 0.58
ATP4AP20648 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP4AP20648 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP4AP20648 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP4AP20648 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP4AP20648 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP4AP20648 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP4AP20648 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP4AP20648 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
ATP4AP20648 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP4AP20648 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATP4AP20648 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ATP4AP20648 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ATP4AP20648 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.64■□□□□ 0.58
ATP4AP20648 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.64■□□□□ 0.58
ATP4AP20648 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 AP001094.4-201ENST00000579008 2176 ntBASIC18.64■□□□□ 0.57
ATP4AP20648 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATP4AP20648 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATP4AP20648 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP4AP20648 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 AL355385.1-201ENST00000606123 409 ntBASIC18.64■□□□□ 0.57
ATP4AP20648 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP4AP20648 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP4AP20648 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
ATP4AP20648 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 WASH6P-202ENST00000359512 1437 ntBASIC18.64■□□□□ 0.57
ATP4AP20648 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP4AP20648 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP4AP20648 AL645728.1-201ENST00000366221 2101 ntBASIC18.64■□□□□ 0.57
ATP4AP20648 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP4AP20648 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP4AP20648 AC016027.1-202ENST00000607927 1699 ntBASIC18.63■□□□□ 0.57
ATP4AP20648 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATP4AP20648 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 AL645939.2-201ENST00000427340 991 ntBASIC18.63■□□□□ 0.57
ATP4AP20648 GPS2P2-201ENST00000430745 888 ntBASIC18.63■□□□□ 0.57
ATP4AP20648 HMGN1P19-201ENST00000436976 333 ntBASIC18.63■□□□□ 0.57
ATP4AP20648 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 RN7SL589P-201ENST00000481268 310 ntBASIC18.63■□□□□ 0.57
ATP4AP20648 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP4AP20648 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP4AP20648 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP4AP20648 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.63■□□□□ 0.57
ATP4AP20648 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.63■□□□□ 0.57
ATP4AP20648 AC009093.7-201ENST00000623853 1223 ntBASIC18.63■□□□□ 0.57
ATP4AP20648 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
ATP4AP20648 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP4AP20648 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP4AP20648 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP4AP20648 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms