Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.86□□□□□ -0.03
ATF1P18846 NTF6B-201ENST00000591913 560 ntBASIC14.86□□□□□ -0.03
ATF1P18846 AC011467.2-201ENST00000598425 242 ntBASIC14.86□□□□□ -0.03
ATF1P18846 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.86□□□□□ -0.03
ATF1P18846 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.86□□□□□ -0.03
ATF1P18846 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.86□□□□□ -0.03
ATF1P18846 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.86□□□□□ -0.03
ATF1P18846 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 AC092850.2-201ENST00000623821 2697 ntBASIC14.85□□□□□ -0.03
ATF1P18846 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 GPR89P-201ENST00000407924 1495 ntBASIC14.85□□□□□ -0.03
ATF1P18846 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 AL031133.1-201ENST00000406807 723 ntBASIC14.85□□□□□ -0.03
ATF1P18846 KLF4P1-201ENST00000412782 1185 ntBASIC14.85□□□□□ -0.03
ATF1P18846 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
ATF1P18846 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.85□□□□□ -0.03
ATF1P18846 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 ME2P1-201ENST00000426028 1970 ntBASIC14.85□□□□□ -0.03
ATF1P18846 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
ATF1P18846 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATF1P18846 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.85□□□□□ -0.03
ATF1P18846 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ATF1P18846 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
ATF1P18846 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ATF1P18846 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 AC092384.3-202ENST00000564646 2873 ntBASIC14.84□□□□□ -0.03
ATF1P18846 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ATF1P18846 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 AC005052.1-201ENST00000625181 2492 ntBASIC14.84□□□□□ -0.03
ATF1P18846 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ATF1P18846 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.84□□□□□ -0.03
ATF1P18846 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.84□□□□□ -0.03
ATF1P18846 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.84□□□□□ -0.03
ATF1P18846 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 AD001527.2-201ENST00000622994 785 ntBASIC14.84□□□□□ -0.03
ATF1P18846 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 AC132938.5-201ENST00000624980 1813 ntBASIC14.84□□□□□ -0.03
ATF1P18846 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.84□□□□□ -0.03
ATF1P18846 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 AC005332.1-201ENST00000577698 1310 ntBASIC14.84□□□□□ -0.03
ATF1P18846 AC104640.1-201ENST00000562617 2109 ntBASIC14.84□□□□□ -0.03
ATF1P18846 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms