Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.7■□□□□ 0.1
PRKCAP17252 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PRKCAP17252 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.7■□□□□ 0.1
PRKCAP17252 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRKCAP17252 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRKCAP17252 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 FAAHP1-202ENST00000446499 1238 ntBASIC15.69■□□□□ 0.1
PRKCAP17252 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.69■□□□□ 0.1
PRKCAP17252 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.69■□□□□ 0.1
PRKCAP17252 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.69■□□□□ 0.1
PRKCAP17252 MTDHP4-201ENST00000600287 670 ntBASIC15.69■□□□□ 0.1
PRKCAP17252 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRKCAP17252 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRKCAP17252 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.69■□□□□ 0.1
PRKCAP17252 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
PRKCAP17252 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.68■□□□□ 0.1
PRKCAP17252 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.68■□□□□ 0.1
PRKCAP17252 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 LINC00982-205ENST00000420957 435 ntBASIC15.68■□□□□ 0.1
PRKCAP17252 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 AC079781.3-201ENST00000449110 356 ntBASIC15.68■□□□□ 0.1
PRKCAP17252 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.68■□□□□ 0.1
PRKCAP17252 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.68■□□□□ 0.1
PRKCAP17252 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.68■□□□□ 0.1
PRKCAP17252 AC021087.4-201ENST00000563761 564 ntBASIC15.68■□□□□ 0.1
PRKCAP17252 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.68■□□□□ 0.1
PRKCAP17252 TP73-AS1-207ENST00000624167 988 ntBASIC15.68■□□□□ 0.1
PRKCAP17252 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRKCAP17252 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 FER1L4-210ENST00000615531 5998 ntBASIC15.68■□□□□ 0.1
PRKCAP17252 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
PRKCAP17252 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRKCAP17252 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms