Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL11A1P12107 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.9■□□□□ 0.62
COL11A1P12107 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.9■□□□□ 0.62
COL11A1P12107 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 AC104794.3-201ENST00000566840 1248 ntBASIC18.9■□□□□ 0.62
COL11A1P12107 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL11A1P12107 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.9■□□□□ 0.62
COL11A1P12107 AL079307.3-201ENST00000556114 283 ntBASIC18.9■□□□□ 0.62
COL11A1P12107 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.9■□□□□ 0.62
COL11A1P12107 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL11A1P12107 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.9■□□□□ 0.62
COL11A1P12107 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL11A1P12107 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.89■□□□□ 0.62
COL11A1P12107 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.89■□□□□ 0.62
COL11A1P12107 RPL37AP1-201ENST00000412502 279 ntBASIC18.89■□□□□ 0.61
COL11A1P12107 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.89■□□□□ 0.61
COL11A1P12107 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.89■□□□□ 0.61
COL11A1P12107 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.89■□□□□ 0.61
COL11A1P12107 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.89■□□□□ 0.61
COL11A1P12107 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
COL11A1P12107 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.89■□□□□ 0.61
COL11A1P12107 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL11A1P12107 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
COL11A1P12107 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 COX5BP8-201ENST00000416911 349 ntBASIC18.88■□□□□ 0.61
COL11A1P12107 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.88■□□□□ 0.61
COL11A1P12107 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.88■□□□□ 0.61
COL11A1P12107 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.88■□□□□ 0.61
COL11A1P12107 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.88■□□□□ 0.61
COL11A1P12107 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.88■□□□□ 0.61
COL11A1P12107 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL11A1P12107 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 GPAA1P2-202ENST00000606848 1787 ntBASIC18.88■□□□□ 0.61
COL11A1P12107 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.88■□□□□ 0.61
COL11A1P12107 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.88■□□□□ 0.61
COL11A1P12107 SPDYE18-201ENST00000510091 1050 ntBASIC18.88■□□□□ 0.61
COL11A1P12107 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.88■□□□□ 0.61
COL11A1P12107 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
COL11A1P12107 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL11A1P12107 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 ZNF890P-202ENST00000530367 1156 ntBASIC18.87■□□□□ 0.61
COL11A1P12107 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 AC024267.1-201ENST00000582320 895 ntBASIC18.87■□□□□ 0.61
COL11A1P12107 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms