Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
MS4A1P11836 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
MS4A1P11836 LINC00895-201ENST00000629028 1637 ntBASIC21.69■■□□□ 1.06
MS4A1P11836 AC008741.2-201ENST00000612792 3115 ntBASIC21.69■■□□□ 1.06
MS4A1P11836 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MS4A1P11836 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.68■■□□□ 1.06
MS4A1P11836 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 AKR1C7P-201ENST00000305623 895 ntBASIC21.68■■□□□ 1.06
MS4A1P11836 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.68■■□□□ 1.06
MS4A1P11836 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.68■■□□□ 1.06
MS4A1P11836 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.68■■□□□ 1.06
MS4A1P11836 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.68■■□□□ 1.06
MS4A1P11836 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MS4A1P11836 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
MS4A1P11836 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.68■■□□□ 1.06
MS4A1P11836 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.68■■□□□ 1.06
MS4A1P11836 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
MS4A1P11836 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MS4A1P11836 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.67■■□□□ 1.06
MS4A1P11836 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.67■■□□□ 1.06
MS4A1P11836 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
MS4A1P11836 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
MS4A1P11836 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.67■■□□□ 1.06
MS4A1P11836 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.67■■□□□ 1.06
MS4A1P11836 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.67■■□□□ 1.06
MS4A1P11836 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.67■■□□□ 1.06
MS4A1P11836 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.67■■□□□ 1.06
MS4A1P11836 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.67■■□□□ 1.06
MS4A1P11836 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.67■■□□□ 1.06
MS4A1P11836 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.67■■□□□ 1.06
MS4A1P11836 CLEC4GP1-201ENST00000596555 870 ntBASIC21.67■■□□□ 1.06
MS4A1P11836 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
MS4A1P11836 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 AL596257.1-201ENST00000641463 2694 ntBASIC21.67■■□□□ 1.06
MS4A1P11836 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MS4A1P11836 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.66■■□□□ 1.06
MS4A1P11836 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.66■■□□□ 1.06
MS4A1P11836 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
MS4A1P11836 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 LAGE3P1-201ENST00000425356 484 ntBASIC21.66■■□□□ 1.06
MS4A1P11836 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.66■■□□□ 1.06
MS4A1P11836 PAWRP1-201ENST00000451083 565 ntBASIC21.66■■□□□ 1.06
MS4A1P11836 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.66■■□□□ 1.06
MS4A1P11836 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.66■■□□□ 1.06
MS4A1P11836 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.66■■□□□ 1.06
MS4A1P11836 AF238378.1-201ENST00000526806 358 ntBASIC21.66■■□□□ 1.06
MS4A1P11836 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 AC006557.2-201ENST00000592985 1240 ntBASIC21.66■■□□□ 1.06
MS4A1P11836 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MS4A1P11836 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
MS4A1P11836 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MS4A1P11836 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MS4A1P11836 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms