Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CD28P10747 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.19□□□□□ -0.3
CD28P10747 AC005237.2-201ENST00000434368 219 ntBASIC13.19□□□□□ -0.3
CD28P10747 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 FAM86C2P-203ENST00000528684 1004 ntBASIC13.19□□□□□ -0.3
CD28P10747 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 AC025678.2-201ENST00000562061 970 ntBASIC13.19□□□□□ -0.3
CD28P10747 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.19□□□□□ -0.3
CD28P10747 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.19□□□□□ -0.3
CD28P10747 AC093512.1-201ENST00000617969 520 ntBASIC13.19□□□□□ -0.3
CD28P10747 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD28P10747 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD28P10747 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.19□□□□□ -0.3
CD28P10747 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.18□□□□□ -0.3
CD28P10747 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.18□□□□□ -0.3
CD28P10747 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.18□□□□□ -0.3
CD28P10747 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.18□□□□□ -0.3
CD28P10747 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.18□□□□□ -0.3
CD28P10747 HLA-J-203ENST00000494367 1087 ntBASIC13.18□□□□□ -0.3
CD28P10747 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.18□□□□□ -0.3
CD28P10747 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CD28P10747 AC005412.3-201ENST00000580309 715 ntBASIC13.18□□□□□ -0.3
CD28P10747 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.18□□□□□ -0.3
CD28P10747 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 AC012569.1-201ENST00000591191 1524 ntBASIC13.18□□□□□ -0.3
CD28P10747 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD28P10747 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD28P10747 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CD28P10747 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.17□□□□□ -0.3
CD28P10747 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.17□□□□□ -0.3
CD28P10747 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CD28P10747 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.17□□□□□ -0.3
CD28P10747 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CD28P10747 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CD28P10747 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 HMGA1P7-201ENST00000406908 502 ntBASIC13.17□□□□□ -0.3
CD28P10747 TFAMP1-201ENST00000412727 736 ntBASIC13.17□□□□□ -0.3
CD28P10747 AL627223.1-201ENST00000416693 442 ntBASIC13.17□□□□□ -0.3
CD28P10747 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.17□□□□□ -0.3
CD28P10747 AL592309.1-201ENST00000443127 649 ntBASIC13.17□□□□□ -0.3
CD28P10747 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.17□□□□□ -0.3
CD28P10747 AC079140.1-201ENST00000508039 487 ntBASIC13.17□□□□□ -0.3
CD28P10747 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.17□□□□□ -0.3
CD28P10747 AC093520.2-201ENST00000561830 333 ntBASIC13.17□□□□□ -0.3
CD28P10747 AC011467.4-201ENST00000594891 528 ntBASIC13.17□□□□□ -0.3
CD28P10747 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms