Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RHOP08100 FOXO1B-201ENST00000504678 1527 ntBASIC17.36■□□□□ 0.37
RHOP08100 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHOP08100 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHOP08100 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHOP08100 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.36■□□□□ 0.37
RHOP08100 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.36■□□□□ 0.37
RHOP08100 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 CROCCP2-202ENST00000412962 2773 ntBASIC17.35■□□□□ 0.37
RHOP08100 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.35■□□□□ 0.37
RHOP08100 MRPS18AP1-201ENST00000414458 589 ntBASIC17.35■□□□□ 0.37
RHOP08100 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.35■□□□□ 0.37
RHOP08100 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.35■□□□□ 0.37
RHOP08100 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.35■□□□□ 0.37
RHOP08100 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 SERBP1P5-201ENST00000510079 1181 ntBASIC17.35■□□□□ 0.37
RHOP08100 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.35■□□□□ 0.37
RHOP08100 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 AC124947.2-201ENST00000547118 1133 ntBASIC17.35■□□□□ 0.37
RHOP08100 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.35■□□□□ 0.37
RHOP08100 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.35■□□□□ 0.37
RHOP08100 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
RHOP08100 TUBB8P12-201ENST00000308911 1335 ntBASIC17.35■□□□□ 0.37
RHOP08100 TUBB7P-202ENST00000428444 1305 ntBASIC17.35■□□□□ 0.37
RHOP08100 TUBB8P7-204ENST00000567960 1332 ntBASIC17.35■□□□□ 0.37
RHOP08100 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.35■□□□□ 0.37
RHOP08100 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RHOP08100 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.35■□□□□ 0.37
RHOP08100 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.34■□□□□ 0.37
RHOP08100 HLA-H-201ENST00000383620 1096 ntBASIC17.34■□□□□ 0.37
RHOP08100 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 TSSK5P-201ENST00000423978 907 ntBASIC17.34■□□□□ 0.37
RHOP08100 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.34■□□□□ 0.37
RHOP08100 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.34■□□□□ 0.37
RHOP08100 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RHOP08100 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
RHOP08100 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RHOP08100 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
RHOP08100 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.34■□□□□ 0.37
RHOP08100 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RHOP08100 AL138828.2-201ENST00000615812 383 ntBASIC17.34■□□□□ 0.37
RHOP08100 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
RHOP08100 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RHOP08100 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RHOP08100 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.33■□□□□ 0.37
RHOP08100 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RHOP08100 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RHOP08100 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.33■□□□□ 0.37
RHOP08100 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.33■□□□□ 0.37
RHOP08100 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RHOP08100 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RHOP08100 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHOP08100 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.33■□□□□ 0.36
RHOP08100 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHOP08100 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RHOP08100 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms