Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.2■□□□□ 0.82
CHGBP05060 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHGBP05060 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHGBP05060 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.2■□□□□ 0.82
CHGBP05060 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CHGBP05060 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHGBP05060 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHGBP05060 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.19■□□□□ 0.82
CHGBP05060 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.19■□□□□ 0.82
CHGBP05060 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.19■□□□□ 0.82
CHGBP05060 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHGBP05060 AC013467.2-201ENST00000605472 835 ntBASIC20.19■□□□□ 0.82
CHGBP05060 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHGBP05060 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHGBP05060 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHGBP05060 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.18■□□□□ 0.82
CHGBP05060 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.18■□□□□ 0.82
CHGBP05060 HLA-A-202ENST00000376806 1854 ntBASIC20.18■□□□□ 0.82
CHGBP05060 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
CHGBP05060 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CHGBP05060 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.18■□□□□ 0.82
CHGBP05060 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHGBP05060 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.18■□□□□ 0.82
CHGBP05060 YBX1P5-201ENST00000509441 847 ntBASIC20.18■□□□□ 0.82
CHGBP05060 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHGBP05060 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.18■□□□□ 0.82
CHGBP05060 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.18■□□□□ 0.82
CHGBP05060 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 AL009183.1-201ENST00000603760 355 ntBASIC20.18■□□□□ 0.82
CHGBP05060 AC134684.3-201ENST00000641758 218 ntBASIC20.18■□□□□ 0.82
CHGBP05060 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHGBP05060 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.18■□□□□ 0.82
CHGBP05060 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.18■□□□□ 0.82
CHGBP05060 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CHGBP05060 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CHGBP05060 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.18■□□□□ 0.82
CHGBP05060 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHGBP05060 PCDH8P1-201ENST00000428983 2773 ntBASIC20.17■□□□□ 0.82
CHGBP05060 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.17■□□□□ 0.82
CHGBP05060 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CHGBP05060 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 MIR1233-2-201ENST00000408138 82 ntBASIC20.17■□□□□ 0.82
CHGBP05060 MIR1233-1-201ENST00000408722 82 ntBASIC20.17■□□□□ 0.82
CHGBP05060 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.17■□□□□ 0.82
CHGBP05060 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CHGBP05060 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.17■□□□□ 0.82
CHGBP05060 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.17■□□□□ 0.82
CHGBP05060 AC005829.1-201ENST00000570002 483 ntBASIC20.17■□□□□ 0.82
CHGBP05060 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHGBP05060 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHGBP05060 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
CHGBP05060 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.16■□□□□ 0.82
CHGBP05060 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CHGBP05060 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms