Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC01238-205ENST00000567549 1107 ntBASIC15.98■□□□□ 0.15
MT-ND1P03886 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.98■□□□□ 0.15
MT-ND1P03886 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.98■□□□□ 0.15
MT-ND1P03886 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND1P03886 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 AL049757.1-201ENST00000616842 1596 ntBASIC15.97■□□□□ 0.15
MT-ND1P03886 KRT8P10-201ENST00000450021 1447 ntBASIC15.97■□□□□ 0.15
MT-ND1P03886 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 AL671277.2-201ENST00000458060 996 ntBASIC15.97■□□□□ 0.15
MT-ND1P03886 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.97■□□□□ 0.15
MT-ND1P03886 GUSBP12-201ENST00000513727 720 ntBASIC15.97■□□□□ 0.15
MT-ND1P03886 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.97■□□□□ 0.15
MT-ND1P03886 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.97■□□□□ 0.15
MT-ND1P03886 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.97■□□□□ 0.15
MT-ND1P03886 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.97■□□□□ 0.15
MT-ND1P03886 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MT-ND1P03886 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.97■□□□□ 0.15
MT-ND1P03886 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND1P03886 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.96■□□□□ 0.15
MT-ND1P03886 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 AL645929.1-201ENST00000420084 975 ntBASIC15.96■□□□□ 0.15
MT-ND1P03886 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.96■□□□□ 0.15
MT-ND1P03886 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.96■□□□□ 0.15
MT-ND1P03886 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MT-ND1P03886 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MT-ND1P03886 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
MT-ND1P03886 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MT-ND1P03886 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MT-ND1P03886 GPR89P-201ENST00000407924 1495 ntBASIC15.96■□□□□ 0.14
MT-ND1P03886 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND1P03886 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.96■□□□□ 0.14
MT-ND1P03886 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND1P03886 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND1P03886 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND1P03886 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND1P03886 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MT-ND1P03886 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.95■□□□□ 0.14
MT-ND1P03886 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms