Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA1P02708 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CHRNA1P02708 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 AC006277.1-201ENST00000624348 1610 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA1P02708 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.21■□□□□ 0.51
CHRNA1P02708 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.21■□□□□ 0.51
CHRNA1P02708 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.21■□□□□ 0.51
CHRNA1P02708 SERBP1P5-201ENST00000510079 1181 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.21■□□□□ 0.51
CHRNA1P02708 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA1P02708 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 AL138828.2-201ENST00000615812 383 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 SPDYE12P-201ENST00000618416 771 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 AL035252.4-201ENST00000624174 288 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.21■□□□□ 0.51
CHRNA1P02708 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 NOC2LP2-201ENST00000407594 1944 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRNA1P02708 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CHRNA1P02708 TUBB8P12-201ENST00000308911 1335 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 TUBB7P-202ENST00000428444 1305 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 TUBB8P7-204ENST00000567960 1332 ntBASIC18.21■□□□□ 0.51
CHRNA1P02708 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.21■□□□□ 0.5
CHRNA1P02708 AC018470.1-201ENST00000624790 3129 ntBASIC18.21■□□□□ 0.5
CHRNA1P02708 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHRNA1P02708 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHRNA1P02708 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA1P02708 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA1P02708 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.2■□□□□ 0.5
CHRNA1P02708 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.2■□□□□ 0.5
CHRNA1P02708 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA1P02708 AC005034.1-201ENST00000426657 489 ntBASIC18.2■□□□□ 0.5
CHRNA1P02708 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA1P02708 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.2■□□□□ 0.5
CHRNA1P02708 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.2■□□□□ 0.5
CHRNA1P02708 AC013467.2-201ENST00000605472 835 ntBASIC18.2■□□□□ 0.5
CHRNA1P02708 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.2■□□□□ 0.5
CHRNA1P02708 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA1P02708 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA1P02708 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA1P02708 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA1P02708 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA1P02708 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 AC073439.1-201ENST00000624121 1774 ntBASIC18.19■□□□□ 0.5
CHRNA1P02708 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRNA1P02708 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 PP12613-201ENST00000424958 2230 ntBASIC18.19■□□□□ 0.5
CHRNA1P02708 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRNA1P02708 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRNA1P02708 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 AC068880.1-201ENST00000507289 2297 ntBASIC18.19■□□□□ 0.5
CHRNA1P02708 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHRNA1P02708 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRNA1P02708 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHRNA1P02708 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA1P02708 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRNA1P02708 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRNA1P02708 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.19■□□□□ 0.5
CHRNA1P02708 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.19■□□□□ 0.5
CHRNA1P02708 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRNA1P02708 AC005225.4-201ENST00000557330 545 ntBASIC18.19■□□□□ 0.5
CHRNA1P02708 AC092068.3-201ENST00000587894 2016 ntBASIC18.19■□□□□ 0.5
CHRNA1P02708 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms