Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LMNAP02545 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LMNAP02545 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMNAP02545 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMNAP02545 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LMNAP02545 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMNAP02545 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMNAP02545 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LMNAP02545 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.68■□□□□ 0.42
LMNAP02545 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.68■□□□□ 0.42
LMNAP02545 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.68■□□□□ 0.42
LMNAP02545 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.68■□□□□ 0.42
LMNAP02545 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMNAP02545 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.68■□□□□ 0.42
LMNAP02545 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMNAP02545 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.67■□□□□ 0.42
LMNAP02545 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.67■□□□□ 0.42
LMNAP02545 AC093214.1-201ENST00000511688 1107 ntBASIC17.67■□□□□ 0.42
LMNAP02545 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.67■□□□□ 0.42
LMNAP02545 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 AC004817.3-201ENST00000602957 2129 ntBASIC17.67■□□□□ 0.42
LMNAP02545 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.67■□□□□ 0.42
LMNAP02545 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.67■□□□□ 0.42
LMNAP02545 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 AC009102.3-201ENST00000623118 1491 ntBASIC17.67■□□□□ 0.42
LMNAP02545 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.67■□□□□ 0.42
LMNAP02545 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LMNAP02545 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMNAP02545 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
LMNAP02545 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.67■□□□□ 0.42
LMNAP02545 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms