Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 AL121772.3-201ENST00000610840 674 ntBASIC16.4■□□□□ 0.22
KRT6AP02538 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KRT6AP02538 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 AC092171.3-201ENST00000610122 2651 ntBASIC16.4■□□□□ 0.22
KRT6AP02538 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6AP02538 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 KRT8P49-201ENST00000604166 1432 ntBASIC16.39■□□□□ 0.21
KRT6AP02538 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT6AP02538 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6AP02538 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6AP02538 NKAPP1-205ENST00000585790 367 ntBASIC16.39■□□□□ 0.21
KRT6AP02538 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 TERC-201ENST00000602385 541 ntBASIC16.39■□□□□ 0.21
KRT6AP02538 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KRT6AP02538 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6AP02538 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6AP02538 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6AP02538 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6AP02538 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6AP02538 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT6AP02538 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
KRT6AP02538 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
KRT6AP02538 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT6AP02538 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 LINC00895-201ENST00000629028 1637 ntBASIC16.38■□□□□ 0.21
KRT6AP02538 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 HLA-A-202ENST00000376806 1854 ntBASIC16.38■□□□□ 0.21
KRT6AP02538 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
KRT6AP02538 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT6AP02538 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT6AP02538 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT6AP02538 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT6AP02538 MTDHP3-201ENST00000594186 672 ntBASIC16.38■□□□□ 0.21
KRT6AP02538 AL732292.2-201ENST00000609649 430 ntBASIC16.38■□□□□ 0.21
KRT6AP02538 AL589182.2-201ENST00000619332 1049 ntBASIC16.38■□□□□ 0.21
KRT6AP02538 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.38■□□□□ 0.21
KRT6AP02538 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT6AP02538 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT6AP02538 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT6AP02538 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
KRT6AP02538 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT6AP02538 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KRT6AP02538 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT6AP02538 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms