Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.88■□□□□ 0.29
TRBC1P01850 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBC1P01850 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBC1P01850 CYP2A7P1-201ENST00000595391 815 ntBASIC16.88■□□□□ 0.29
TRBC1P01850 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRBC1P01850 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.88■□□□□ 0.29
TRBC1P01850 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBC1P01850 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBC1P01850 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBC1P01850 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TRBC1P01850 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBC1P01850 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRBC1P01850 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBC1P01850 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRBC1P01850 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBC1P01850 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBC1P01850 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.87■□□□□ 0.29
TRBC1P01850 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBC1P01850 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 PRORSD1P-202ENST00000563365 2154 ntBASIC16.87■□□□□ 0.29
TRBC1P01850 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 HMGA1P7-201ENST00000406908 502 ntBASIC16.87■□□□□ 0.29
TRBC1P01850 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBC1P01850 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBC1P01850 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.87■□□□□ 0.29
TRBC1P01850 AC002347.1-201ENST00000569543 541 ntBASIC16.87■□□□□ 0.29
TRBC1P01850 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
TRBC1P01850 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRBC1P01850 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBC1P01850 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 AD000864.1-201ENST00000624076 2295 ntBASIC16.86■□□□□ 0.29
TRBC1P01850 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBC1P01850 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBC1P01850 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBC1P01850 AC004832.2-201ENST00000426397 482 ntBASIC16.86■□□□□ 0.29
TRBC1P01850 AC074386.1-202ENST00000463561 864 ntBASIC16.86■□□□□ 0.29
TRBC1P01850 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBC1P01850 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
TRBC1P01850 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBC1P01850 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRBC1P01850 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBC1P01850 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRBC1P01850 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBC1P01850 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBC1P01850 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRBC1P01850 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBC1P01850 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms