Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.65■□□□□ 0.58
LGR5O75473 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.65■□□□□ 0.58
LGR5O75473 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LGR5O75473 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
LGR5O75473 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.65■□□□□ 0.58
LGR5O75473 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LGR5O75473 AC092068.3-201ENST00000587894 2016 ntBASIC18.64■□□□□ 0.58
LGR5O75473 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
LGR5O75473 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LGR5O75473 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.64■□□□□ 0.57
LGR5O75473 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 AP000842.3-202ENST00000569238 1080 ntBASIC18.64■□□□□ 0.57
LGR5O75473 AC027307.2-201ENST00000591252 911 ntBASIC18.64■□□□□ 0.57
LGR5O75473 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.64■□□□□ 0.57
LGR5O75473 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.64■□□□□ 0.57
LGR5O75473 TNRC18P3-201ENST00000441896 2691 ntBASIC18.64■□□□□ 0.57
LGR5O75473 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LGR5O75473 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LGR5O75473 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LGR5O75473 SNX33P1-201ENST00000592116 1762 ntBASIC18.63■□□□□ 0.57
LGR5O75473 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LGR5O75473 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.63■□□□□ 0.57
LGR5O75473 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.63■□□□□ 0.57
LGR5O75473 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.63■□□□□ 0.57
LGR5O75473 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.63■□□□□ 0.57
LGR5O75473 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.63■□□□□ 0.57
LGR5O75473 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.63■□□□□ 0.57
LGR5O75473 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LGR5O75473 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
LGR5O75473 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 UXT-AS1-201ENST00000590504 1525 ntBASIC18.63■□□□□ 0.57
LGR5O75473 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LGR5O75473 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LGR5O75473 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.63■□□□□ 0.57
LGR5O75473 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LGR5O75473 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LGR5O75473 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LGR5O75473 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LGR5O75473 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.62■□□□□ 0.57
LGR5O75473 RBPMS2P1-201ENST00000437762 623 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms