Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC106730.1-201ENST00000566722 1090 ntBASIC16.03■□□□□ 0.16
LRIT2A6NDA9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT2A6NDA9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 CYP2A7P1-201ENST00000595391 815 ntBASIC16.02■□□□□ 0.16
LRIT2A6NDA9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRIT2A6NDA9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.02■□□□□ 0.15
LRIT2A6NDA9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 SNX33P1-201ENST00000592116 1762 ntBASIC16.02■□□□□ 0.15
LRIT2A6NDA9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.02■□□□□ 0.15
LRIT2A6NDA9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 HLA-A-202ENST00000376806 1854 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AC092171.3-201ENST00000610122 2651 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 RHOQP3-201ENST00000437982 621 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 MIR4515-201ENST00000584082 81 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AC064836.3-201ENST00000607928 673 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AP001350.2-201ENST00000625104 1094 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 AC010507.1-201ENST00000633895 436 ntBASIC16.01■□□□□ 0.15
LRIT2A6NDA9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRIT2A6NDA9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms