Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCHNA4D1U4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCHNA4D1U4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 AC140912.1-201ENST00000577171 1054 ntBASIC17.97■□□□□ 0.47
LCHNA4D1U4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCHNA4D1U4 AC026471.1-201ENST00000564629 3026 ntBASIC17.97■□□□□ 0.47
LCHNA4D1U4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LCHNA4D1U4 AC138932.1-201ENST00000534164 6830 ntBASIC17.97■□□□□ 0.47
LCHNA4D1U4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCHNA4D1U4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 LETM1P2-201ENST00000597330 2178 ntBASIC17.96■□□□□ 0.47
LCHNA4D1U4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 DGCR5-201ENST00000399539 862 ntBASIC17.96■□□□□ 0.47
LCHNA4D1U4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 GNAQP1-201ENST00000444815 1067 ntBASIC17.96■□□□□ 0.47
LCHNA4D1U4 INE1-201ENST00000456273 945 ntBASIC17.96■□□□□ 0.47
LCHNA4D1U4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 AC073389.1-201ENST00000595595 795 ntBASIC17.96■□□□□ 0.47
LCHNA4D1U4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.96■□□□□ 0.47
LCHNA4D1U4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCHNA4D1U4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
LCHNA4D1U4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
LCHNA4D1U4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 AC131009.4-201ENST00000624048 1740 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 RPL37AP1-201ENST00000412502 279 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 MPDU1-223ENST00000582151 728 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 AC087499.5-201ENST00000452760 1342 ntBASIC17.95■□□□□ 0.46
LCHNA4D1U4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCHNA4D1U4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.95■□□□□ 0.46
LCHNA4D1U4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCHNA4D1U4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCHNA4D1U4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCHNA4D1U4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms