Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC244107.1-201ENST00000442033 332 ntBASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 SPDYE12P-201ENST00000618416 771 ntBASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCDC144AA2RUR9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC144AA2RUR9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 UGT1A2P-201ENST00000454886 866 ntBASIC24■■□□□ 1.43
CCDC144AA2RUR9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC24■■□□□ 1.43
CCDC144AA2RUR9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 MIR661-201ENST00000384842 89 ntBASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AC097493.3-201ENST00000509725 367 ntBASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC144AA2RUR9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 AL512652.2-201ENST00000625156 1716 ntBASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC23.98■■□□□ 1.43
CCDC144AA2RUR9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC144AA2RUR9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms