Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 AC133561.4-201ENST00000566112 224 ntBASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 MFSD11-216ENST00000590393 1141 ntBASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 AC022898.2-201ENST00000616822 1312 ntBASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 AC148477.4-201ENST00000613430 1793 ntBASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 AC005562.1-201ENST00000583030 3219 ntBASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AC016027.1-202ENST00000607927 1699 ntBASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 HES2-205ENST00000487437 968 ntTSL 3 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 MTDHP2-201ENST00000601468 714 ntBASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AC092171.4-201ENST00000609130 632 ntBASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AC129492.7-201ENST00000622992 756 ntBASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 DKFZP434H168-201ENST00000567381 1905 ntBASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 AC097637.2-201ENST00000624096 1997 ntBASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01558Q9Y6Z2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms