Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCA3PQ9Y6N3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCA3PQ9Y6N3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCA3PQ9Y6N3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCA3PQ9Y6N3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 AL022342.1-201ENST00000400363 863 ntBASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 AF228730.7-201ENST00000641842 219 ntBASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCA3PQ9Y6N3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 AL162727.3-201ENST00000635661 2787 ntBASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 AC104109.2-201ENST00000602919 1418 ntBASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 AP001094.4-201ENST00000579008 2176 ntBASIC16.02■□□□□ 0.15
CLCA3PQ9Y6N3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 AC108751.1-201ENST00000490852 363 ntBASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 IGHV3-65-201ENST00000523210 341 ntBASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 Z83851.2-201ENST00000609564 659 ntBASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLCA3PQ9Y6N3 AL391005.1-201ENST00000623953 2435 ntBASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 AC145285.3-201ENST00000564603 959 ntBASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16■□□□□ 0.15
CLCA3PQ9Y6N3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms