Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 MYCLP1-201ENST00000372451 1075 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AC005104.2-201ENST00000427818 678 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 UPK3BP1-201ENST00000428678 509 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ATP5G2P1-201ENST00000433580 426 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AC122714.2-201ENST00000502787 707 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AC111152.3-201ENST00000569699 673 ntBASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HHLA3Q9XRX5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC078925.2-201ENST00000624013 1973 ntBASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC002558.1-201ENST00000488906 803 ntBASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC074051.2-201ENST00000565115 352 ntBASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC012615.1-201ENST00000565797 1299 ntBASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC092119.3-201ENST00000612618 583 ntBASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.41□□□□□ -0.42
HHLA3Q9XRX5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms