Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 UXT-AS1-201ENST00000590504 1525 ntBASIC16.03■□□□□ 0.16
LHX6Q9UPM6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 AC009113.1-201ENST00000570267 2443 ntBASIC16.03■□□□□ 0.16
LHX6Q9UPM6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.03■□□□□ 0.16
LHX6Q9UPM6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AC022210.1-201ENST00000449856 793 ntBASIC16.02■□□□□ 0.16
LHX6Q9UPM6 SETP12-201ENST00000514068 805 ntBASIC16.02■□□□□ 0.16
LHX6Q9UPM6 DUTP2-201ENST00000519164 463 ntBASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AC087272.1-201ENST00000523624 533 ntBASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AL135744.1-201ENST00000565098 629 ntBASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.02■□□□□ 0.16
LHX6Q9UPM6 AC132938.5-201ENST00000624980 1813 ntBASIC16.02■□□□□ 0.16
LHX6Q9UPM6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.02■□□□□ 0.15
LHX6Q9UPM6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AC022144.1-201ENST00000602255 1580 ntBASIC16.01■□□□□ 0.15
LHX6Q9UPM6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 ELK2AP-201ENST00000392510 1007 ntBASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AL512384.1-201ENST00000406683 331 ntBASIC16.01■□□□□ 0.15
LHX6Q9UPM6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AC140912.1-201ENST00000577171 1054 ntBASIC16.01■□□□□ 0.15
LHX6Q9UPM6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.01■□□□□ 0.15
LHX6Q9UPM6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LHX6Q9UPM6 AL049757.1-201ENST00000616842 1596 ntBASIC16■□□□□ 0.15
LHX6Q9UPM6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16■□□□□ 0.15
LHX6Q9UPM6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms