Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC018735.1-201ENST00000437208 1502 ntBASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 PRKXP1-201ENST00000561423 1122 ntBASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 AP000346.4-201ENST00000614827 381 ntBASIC26.25■■□□□ 1.79
RIMBP3Q9UFD9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 CNN2P8-201ENST00000421872 913 ntBASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC26.24■■□□□ 1.79
RIMBP3Q9UFD9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 MNT-208ENST00000575394 606 ntTSL 4 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIMBP3Q9UFD9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 SOCS2P1-201ENST00000417727 557 ntBASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 ATP6V0CP2-201ENST00000469409 207 ntBASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RIMBP3Q9UFD9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 SERF2-206ENST00000409291 807 ntTSL 3 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 BAATP1-201ENST00000412284 1225 ntBASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 EEF1DP6-201ENST00000449232 372 ntBASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 MIR3907-201ENST00000579424 151 ntBASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 AC134698.3-201ENST00000523880 214 ntBASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC26.21■■□□□ 1.79
RIMBP3Q9UFD9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.79
RIMBP3Q9UFD9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 AHCYP2-201ENST00000430630 1300 ntBASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 HNRNPA1P48-202ENST00000565308 961 ntBASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 INTS4P2-202ENST00000614726 2019 ntBASIC26.2■■□□□ 1.78
RIMBP3Q9UFD9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms