Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4Q9NQC3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AL122018.1-201ENST00000446607 2310 ntBASIC20.04■□□□□ 0.8
RTN4Q9NQC3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 NUDT16P1-203ENST00000513809 620 ntBASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTN4Q9NQC3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 AL135905.2-201ENST00000584934 1404 ntBASIC20.03■□□□□ 0.8
RTN4Q9NQC3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 AC097488.1-201ENST00000507834 756 ntBASIC20.03■□□□□ 0.8
RTN4Q9NQC3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 RN7SL275P-201ENST00000582762 335 ntBASIC20.03■□□□□ 0.8
RTN4Q9NQC3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 FAM197Y4-202ENST00000622692 608 ntBASIC20.03■□□□□ 0.8
RTN4Q9NQC3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN4Q9NQC3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC20.02■□□□□ 0.8
RTN4Q9NQC3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4Q9NQC3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms