Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 KRT18P2-201ENST00000447938 1258 ntBASIC15.86■□□□□ 0.13
LYRM4Q9HD34 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 AC006538.1-201ENST00000567905 1585 ntBASIC15.86■□□□□ 0.13
LYRM4Q9HD34 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 RNF216P1-203ENST00000404404 2427 ntBASIC15.86■□□□□ 0.13
LYRM4Q9HD34 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYRM4Q9HD34 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 PCDHA12-202ENST00000613593 2588 ntBASIC15.85■□□□□ 0.13
LYRM4Q9HD34 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.85■□□□□ 0.13
LYRM4Q9HD34 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 AC004877.2-201ENST00000623941 599 ntBASIC15.85■□□□□ 0.13
LYRM4Q9HD34 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 SNX33P1-201ENST00000592116 1762 ntBASIC15.85■□□□□ 0.13
LYRM4Q9HD34 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYRM4Q9HD34 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 MIR574-201ENST00000385209 96 ntBASIC15.84■□□□□ 0.13
LYRM4Q9HD34 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 HMGA1P7-201ENST00000406908 502 ntBASIC15.84■□□□□ 0.13
LYRM4Q9HD34 AGGF1P2-201ENST00000426656 2106 ntBASIC15.84■□□□□ 0.13
LYRM4Q9HD34 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 AC018845.2-201ENST00000568326 409 ntBASIC15.84■□□□□ 0.13
LYRM4Q9HD34 NKILA-202ENST00000614771 2598 ntBASIC15.84■□□□□ 0.13
LYRM4Q9HD34 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 BCAR1-209ENST00000546196 1340 ntBASIC15.84■□□□□ 0.13
LYRM4Q9HD34 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.84■□□□□ 0.13
LYRM4Q9HD34 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
LYRM4Q9HD34 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYRM4Q9HD34 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYRM4Q9HD34 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYRM4Q9HD34 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms