Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 KRT8P37-201ENST00000451609 1420 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 EGFEM1P-202ENST00000431685 1563 ntBASIC15.45■□□□□ 0.06
CHD8Q9HCK8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHD8Q9HCK8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.44■□□□□ 0.06
CHD8Q9HCK8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 AC131009.4-201ENST00000624048 1740 ntBASIC15.44■□□□□ 0.06
CHD8Q9HCK8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 AC026954.1-201ENST00000429771 1293 ntBASIC15.44■□□□□ 0.06
CHD8Q9HCK8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 KRT18P66-201ENST00000452970 1269 ntBASIC15.44■□□□□ 0.06
CHD8Q9HCK8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 CLK3P2-201ENST00000427566 1453 ntBASIC15.44■□□□□ 0.06
CHD8Q9HCK8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHD8Q9HCK8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 AL162726.2-201ENST00000438986 1017 ntBASIC15.43■□□□□ 0.06
CHD8Q9HCK8 FTLP10-202ENST00000505798 471 ntBASIC15.43■□□□□ 0.06
CHD8Q9HCK8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CHD8Q9HCK8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 AL591846.1-201ENST00000451736 433 ntBASIC15.42■□□□□ 0.06
CHD8Q9HCK8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms