Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NOC2LP2-201ENST00000407594 1944 ntBASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 AC108860.2-201ENST00000562760 2183 ntBASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AC007541.1-201ENST00000570282 1469 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AC140912.1-201ENST00000577171 1054 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 AC073439.1-201ENST00000624121 1774 ntBASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.3■□□□□ 0.84
RTFDC1Q9BY42 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AC098614.1-201ENST00000368528 745 ntBASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AL080243.2-201ENST00000418783 582 ntBASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AC098859.1-201ENST00000502915 1238 ntBASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AC105021.1-202ENST00000570572 669 ntBASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTFDC1Q9BY42 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 BTBD7P1-201ENST00000447253 1453 ntBASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 AC138969.3-201ENST00000546612 1459 ntBASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 AC138932.2-201ENST00000548268 1459 ntBASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 AC126755.4-201ENST00000549796 1459 ntBASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms