Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 TOP3BP1-201ENST00000420768 1380 ntBASIC16.26■□□□□ 0.19
CDC6Q99741 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC6Q99741 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 AC016027.1-202ENST00000607927 1699 ntBASIC16.25■□□□□ 0.19
CDC6Q99741 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDC6Q99741 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 AC018470.1-201ENST00000624790 3129 ntBASIC16.25■□□□□ 0.19
CDC6Q99741 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CDC6Q99741 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC6Q99741 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 ATP5G2P4-201ENST00000442175 420 ntBASIC16.25■□□□□ 0.19
CDC6Q99741 SPTLC1P1-201ENST00000447199 261 ntBASIC16.25■□□□□ 0.19
CDC6Q99741 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC6Q99741 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.25■□□□□ 0.19
CDC6Q99741 RARRES2P9-201ENST00000565168 469 ntBASIC16.25■□□□□ 0.19
CDC6Q99741 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.25■□□□□ 0.19
CDC6Q99741 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC6Q99741 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC6Q99741 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC6Q99741 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC6Q99741 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC6Q99741 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CDC6Q99741 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 NOC2LP2-201ENST00000407594 1944 ntBASIC16.24■□□□□ 0.19
CDC6Q99741 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDC6Q99741 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC6Q99741 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.24■□□□□ 0.19
CDC6Q99741 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC6Q99741 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC6Q99741 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.24■□□□□ 0.19
CDC6Q99741 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC6Q99741 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDC6Q99741 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDC6Q99741 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC6Q99741 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDC6Q99741 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CDC6Q99741 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC6Q99741 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC6Q99741 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms