Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 AC099522.2-201ENST00000607001 744 ntBASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 CNN2P11-201ENST00000429351 262 ntBASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP1Q96SZ6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AC012313.1-201ENST00000593393 3059 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 OR6D1P-203ENST00000641209 4860 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AC004835.2-201ENST00000603762 682 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AC026120.1-201ENST00000611536 926 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AL513210.1-201ENST00000629608 234 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AL139011.1-202ENST00000642063 584 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 AC092068.3-201ENST00000587894 2016 ntBASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK5RAP1Q96SZ6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDK5RAP1Q96SZ6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CDK5RAP1Q96SZ6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDK5RAP1Q96SZ6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms