Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3BQ96PB8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 CRB3P1-201ENST00000449338 276 ntBASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 PCDHB17P-201ENST00000539533 2393 ntBASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3BQ96PB8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 AC013467.2-201ENST00000605472 835 ntBASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3BQ96PB8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AC244107.1-201ENST00000442033 332 ntBASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 GAPDHP21-201ENST00000450301 1010 ntBASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 BANF1P1-201ENST00000553684 263 ntBASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AC009407.1-201ENST00000568958 598 ntBASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 SPTSSB-204ENST00000617024 1292 ntBASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AC022144.1-201ENST00000602255 1580 ntBASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3BQ96PB8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms