Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 CRB3P1-201ENST00000449338 276 ntBASIC17.86■□□□□ 0.45
CASD1Q96PB1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 SNX33P1-201ENST00000592116 1762 ntBASIC17.86■□□□□ 0.45
CASD1Q96PB1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASD1Q96PB1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.86■□□□□ 0.45
CASD1Q96PB1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 AC244107.1-201ENST00000442033 332 ntBASIC17.85■□□□□ 0.45
CASD1Q96PB1 HLA-V-204ENST00000476601 1289 ntBASIC17.85■□□□□ 0.45
CASD1Q96PB1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 AC022144.1-201ENST00000602255 1580 ntBASIC17.85■□□□□ 0.45
CASD1Q96PB1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASD1Q96PB1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CASD1Q96PB1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 FAM220BP-201ENST00000377689 816 ntBASIC17.84■□□□□ 0.45
CASD1Q96PB1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.84■□□□□ 0.45
CASD1Q96PB1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.84■□□□□ 0.45
CASD1Q96PB1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.84■□□□□ 0.45
CASD1Q96PB1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.84■□□□□ 0.45
CASD1Q96PB1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASD1Q96PB1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.83■□□□□ 0.45
CASD1Q96PB1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CASD1Q96PB1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.83■□□□□ 0.45
CASD1Q96PB1 KRT8P39-201ENST00000396270 1433 ntBASIC17.83■□□□□ 0.45
CASD1Q96PB1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CASD1Q96PB1 AL035456.1-201ENST00000456064 1369 ntBASIC17.83■□□□□ 0.45
CASD1Q96PB1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASD1Q96PB1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.83■□□□□ 0.44
CASD1Q96PB1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms