Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 MIR4469-201ENST00000583919 79 ntBASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 AL671710.1-201ENST00000610245 2349 ntBASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 AC012313.1-201ENST00000593393 3059 ntBASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ECHDC3Q96DC8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 KRT8P39-201ENST00000396270 1433 ntBASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.82■□□□□ 0.28
ECHDC3Q96DC8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.81■□□□□ 0.28
ECHDC3Q96DC8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms