Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 SNHG9-202ENST00000564014 471 ntBASIC17.82■□□□□ 0.44
ATP2A3Q93084 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 LINC01451-201ENST00000623792 534 ntBASIC17.82■□□□□ 0.44
ATP2A3Q93084 AC004877.2-201ENST00000623941 599 ntBASIC17.82■□□□□ 0.44
ATP2A3Q93084 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A3Q93084 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A3Q93084 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 BCAR1-209ENST00000546196 1340 ntBASIC17.81■□□□□ 0.44
ATP2A3Q93084 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 AC254562.1-201ENST00000417586 456 ntBASIC17.81■□□□□ 0.44
ATP2A3Q93084 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 OR7E47P-204ENST00000575924 449 ntBASIC17.81■□□□□ 0.44
ATP2A3Q93084 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 AL078644.1-201ENST00000609881 752 ntBASIC17.81■□□□□ 0.44
ATP2A3Q93084 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 AC046185.3-201ENST00000623228 1824 ntBASIC17.81■□□□□ 0.44
ATP2A3Q93084 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A3Q93084 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A3Q93084 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms