Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 AC009102.3-201ENST00000623118 1491 ntBASIC15.55■□□□□ 0.08
HPS1Q92902 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 AC092597.1-201ENST00000487352 616 ntBASIC15.55■□□□□ 0.08
HPS1Q92902 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.55■□□□□ 0.08
HPS1Q92902 NPAP1P7-201ENST00000613027 823 ntBASIC15.55■□□□□ 0.08
HPS1Q92902 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.55■□□□□ 0.08
HPS1Q92902 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.54■□□□□ 0.08
HPS1Q92902 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.54■□□□□ 0.08
HPS1Q92902 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.54■□□□□ 0.08
HPS1Q92902 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 MIR3652-201ENST00000579335 131 ntBASIC15.54■□□□□ 0.08
HPS1Q92902 AC092329.2-201ENST00000598402 547 ntBASIC15.54■□□□□ 0.08
HPS1Q92902 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.54■□□□□ 0.08
HPS1Q92902 AC104581.4-201ENST00000623126 3052 ntBASIC15.54■□□□□ 0.08
HPS1Q92902 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HPS1Q92902 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.54■□□□□ 0.08
HPS1Q92902 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HPS1Q92902 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 TSSC2-201ENST00000450217 709 ntBASIC15.53■□□□□ 0.08
HPS1Q92902 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.53■□□□□ 0.08
HPS1Q92902 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 AL157888.1-201ENST00000631930 593 ntBASIC15.53■□□□□ 0.08
HPS1Q92902 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms