Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 AL353593.2-201ENST00000602529 1483 ntBASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CKAP2Q8WWK9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 AC006058.4-201ENST00000624016 1670 ntBASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 TSPY7P-201ENST00000431358 1114 ntBASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 AC141257.4-201ENST00000634557 245 ntBASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 AC136944.6-201ENST00000634818 245 ntBASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.82■□□□□ 0.28
CKAP2Q8WWK9 GGT3P-204ENST00000453783 1664 ntBASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 AC002310.6-201ENST00000624451 1377 ntBASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 AC073912.3-201ENST00000624414 853 ntBASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 AL139011.1-202ENST00000642063 584 ntBASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CKAP2Q8WWK9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AC006449.6-201ENST00000612330 2296 ntBASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 KRT17P2-201ENST00000300992 1314 ntBASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKAP2Q8WWK9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms