Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC027601.4-201ENST00000611259 610 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 AC010507.1-201ENST00000633895 436 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 FLJ38576-201ENST00000623820 2459 ntBASIC17.87■□□□□ 0.45
UBA3Q8TBC4 AL391256.1-201ENST00000443260 1855 ntBASIC17.87■□□□□ 0.45
UBA3Q8TBC4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 MED15P5-201ENST00000423150 992 ntBASIC17.87■□□□□ 0.45
UBA3Q8TBC4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 KRT18P3-201ENST00000451602 1288 ntBASIC17.87■□□□□ 0.45
UBA3Q8TBC4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 POLD2P1-201ENST00000511220 997 ntBASIC17.87■□□□□ 0.45
UBA3Q8TBC4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 PRORSD1P-202ENST00000563365 2154 ntBASIC17.87■□□□□ 0.45
UBA3Q8TBC4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBA3Q8TBC4 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.86■□□□□ 0.45
UBA3Q8TBC4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 AL513480.1-201ENST00000451731 511 ntBASIC17.86■□□□□ 0.45
UBA3Q8TBC4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBA3Q8TBC4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms