Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 AP001269.4-201ENST00000609611 512 ntBASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLHC1Q8NHS4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.27■□□□□ 0.19
CLHC1Q8NHS4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 TUBB7P-202ENST00000428444 1305 ntBASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 AC091076.1-201ENST00000610741 619 ntBASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLHC1Q8NHS4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 AC132008.2-207ENST00000454517 770 ntBASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 FOSL1P1-201ENST00000511041 816 ntBASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 DUX4L17-201ENST00000557360 1267 ntBASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 AL732292.2-201ENST00000609649 430 ntBASIC16.25■□□□□ 0.19
CLHC1Q8NHS4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms