Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 HCG4B-203ENST00000450128 991 ntBASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 CXCL1P1-201ENST00000502804 216 ntBASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 AL353732.1-201ENST00000569618 1459 ntBASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC148Q8NFR7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 AL022342.1-201ENST00000400363 863 ntBASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC148Q8NFR7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 LINC00895-201ENST00000629028 1637 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 AC022211.2-201ENST00000585075 2527 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 IGLL3P-201ENST00000412472 434 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 AL591424.1-201ENST00000442569 1213 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 FAM185BP-201ENST00000443595 716 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 MPDU1-223ENST00000582151 728 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 AC064836.3-201ENST00000607928 673 ntBASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC148Q8NFR7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms